MRIQC: individual T1w report

Summary

Subject ID: 001_T2.
Date and time: 2018-06-27, 23:55.
MRIQC version: 0.10.6.
Workflow details:
- File has no metadata (sidecar JSON file missing or empty)

Visual reports

Zoomed-in (brain mask)

Background noise

Extracted Image Quality Metrics (IQMs)

cjv			0.3087538297430394
cnr			4.021532711542652
efc			0.6076068740337016
fber			62.915626525878906
fwhm	avg		3.7269072637757232
fwhm	x		3.72825
fwhm	y		3.90669
fwhm	z		3.545781791327169
icvs	csf		0.2303072548830161
icvs	gm		0.4429575113719537
icvs	wm		0.3267352337450302
inu	med		0.840380072593689
inu	range		0.3275175660848617
qi	1		0.0
qi	2		0.0026291610300018206
rpve	csf		19.955324170537843
rpve	gm		10.81760840723047
rpve	wm		16.8187547672299
size	x		256
size	y		256
size	z		160
snr	csf		3.5823786183868007
snr	gm		10.51817920713919
snr	total		11.14148688481214
snr	wm		19.323902828910434
snrd	csf		12.331404976817865
snrd	gm		20.99650379393539
snrd	total		21.68959019220814
snrd	wm		31.740861805871155
spacing	x		1.0
spacing	y		1.0
spacing	z		1.000030517578125
summary	bg	k	0.6481208634799063
summary	bg	mad	20.640308380126953
summary	bg	mean	71.98167419433594
summary	bg	median	70.12715148925781
summary	bg	n	3364989.0
summary	bg	p05	40.51323547363281
summary	bg	p95	109.73814697265624
summary	bg	stdv	21.257200241088867
summary	csf	k	-0.172242393580607
summary	csf	mad	115.84284973144531
summary	csf	mean	385.40557861328125
summary	csf	median	388.50537109375
summary	csf	n	40144.0
summary	csf	p05	209.49949645996094
summary	csf	p95	556.9708679199218
summary	csf	stdv	108.44764709472656
summary	gm	k	0.8588757372797069
summary	gm	mad	56.381866455078125
summary	gm	mean	664.4970703125
summary	gm	median	661.50244140625
summary	gm	n	38548.0
summary	gm	p05	567.074041748047
summary	gm	p95	774.2881805419922
summary	gm	stdv	62.89052963256836
summary	wm	k	0.7670909906701815
summary	wm	mad	48.1328125
summary	wm	mean	998.1658325195312
summary	wm	median	1000.00732421875
summary	wm	n	194035.0
summary	wm	p05	910.1422424316406
summary	wm	p95	1078.62373046875
summary	wm	stdv	51.74962615966797
tpm	overlap	csf	0.2044724076986313
tpm	overlap	gm	0.515279233455658
tpm	overlap	wm	0.5270431637763977
wm2max			0.6555837650037281

Provenance information

md5sum	4600df519a770d475f60e9efaed1bd23
software	mriqc
version	0.10.6

Rate Image

Rating	Count
Invalid
Exclude
Usable
Good

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.